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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs58616630 chr6:27474715 A/G BTN3A2 chr6:26365387-26378548:+ -0.87 -12.59 1.31E-31 Box Plot
THCA rs58616630 chr6:27474715 A/G ZFP57 chr6:29640169-29648887:- 0.85 8.16 3.09E-15 Box Plot
THCA rs586322 chr17:18291544 A/G LOC162632 chr17:16614993-16707819:+ 0.47 8.13 3.62E-15 Box Plot
THCA rs58647694 chr7:140172258 A/G LOC441455 chr9:99488103-99489749:+ 0.48 6.29 7.18E-10 Box Plot
THCA rs58654859 chr5:170809480 GA/G CLEC2D chr12:9817565-9852151:+ -0.19 -5.92 6.04E-9 Box Plot
THCA rs586757 chr17:18291618 C/T LOC162632 chr17:16614993-16707819:+ 0.47 8.14 3.35E-15 Box Plot
THCA rs5867709 chr5:45840713 A/AT LOC647121 chr1:121260910-121313686:+ -0.38 -8.17 2.78E-15 Box Plot
THCA rs58677292 chr10:51812897 T/C FAM21B chr10:47894023-47949412:+ 0.56 7.31 1.11E-12 Box Plot
THCA rs58678146 chr14:66756023 C/T ATP6V1D chr14:67761088-67826982:- 0.43 7.41 5.94E-13 Box Plot
THCA rs58685513 chr2:132256059 CTG/C CCDC74B chr2:130896860-130902707:- 0.4 7.2 2.42E-12 Box Plot
THCA rs58690526 chr6:99465263 A/T BAALC chr8:104152938-104242533:+ 0.34 6.17 1.43E-9 Box Plot
THCA rs58698651 chr7:140160046 CAAAAA/C LOC441455 chr9:99488103-99489749:+ 0.51 6.97 1.08E-11 Box Plot
THCA rs58716393 chr2:132208395 C/T CCDC74B chr2:130896860-130902707:- 0.35 6.1 2.19E-9 Box Plot
THCA rs5872262 chr5:151678216 C/CA FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs5873567 chr5:176555581 G/GA LOC388955 chr2:63849182-63850159:- -0.38 -8.95 7.64E-18 Box Plot